Reagent Preparation
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All buffers should be prepared fresh. - Lysis buffer: Tris-HCl, pH 7.4, 125 mM, NaCl 150 mM, DTT 1 mM, EDTA 1 mM, Lysozyme 1 mg/mL, Triton X-100 1 % (v/v), Protease inhibitor 1x
- Wash buffer: Tris-HCl, pH 7.4, 125 mM, NaCl 150 mM, DTT 1 mM, EDTA 1 mM.
Optional: ATP buffer: Tris HCl, pH 7.4, 50 mM, ATP 2 mM, MgSO4 10 mM - Elution buffer: Tris base, pH 7.4, 125 mM, NaCl 150 mM, Triton X-100 0.1 % (v/v), Reduced glutathione 50 mM, DTT 1 mM
Note: Optimal buffer conditions may vary depending on the protein of interest. Optimal pH can be varied from pH 7.4-8.0. Some proteins may require addition of protease inhibitor cocktail, EDTA, 1-5 mM DTT, 1 % BSA, or detergents such as 0.5-1 % Igepal CA-630 (Nonindet P-40) or 0.5-1 % Tween-20.
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Assay Procedure
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Protein purification protocol: - Thaw the E. coli cell pellets corresponding to 200 mL bacterial culture on ice for 15 min. Optional: Freezing the cell pellet at -20 °C for 30 min prior to incubation at room temperature improves lysis by lysozyme.
- Resuspend the cell pellet in 10 mL Lysis Buffer and pour it into a 50 mL conical centrifuge tube. If the solution is very viscous, add 3 units Benzonase® per mL E.coli culture volume to the lysis buffer. Alternatively or additionally, sonicate the lysate to improve cell disruption.
- Incubate on an end-over-end shaker at room temperature for 30 min, or at 4 °C for 1 h, depending on the temperature stability of the protein.
- Centrifuge the lysate at 10.000 x g for 30 min at 2-8 °C and carefully collect the supernatant without touching the pellet. Note: The supernatant contains the cleared lysate fraction. We recommend to take aliquots of all fractions for SDS-PAGE analysis.
- Resuspend the PureCube Glutathione Agarose by inverting the bottle until the suspension is homogeneous. Transfer 1 mL of the 50 % suspension (corresponding to 500 μL bed volume) into a 15 mL conical centrifuge tube. Allow the resin to settle by gravity and remove the supernatant. Tip: Alternatively, resin equilibration can be performed directly in the disposable gravity flow column.
- Add 5 mL of Wash Buffer and gently resupend the suspension to equilibrate the resin. Allow the resin to settle by gravity and remove the supernatant.
- Add the cleared lysate prepared in step 4 and incubate at 4 °C for 1 h on an end-over-end shaker. Tip: Alternatively, batch binding can be performed directly in a gravity flow column with closed bottom and top outlets.
- Pour the complete suspension into a disposable gravity flow column with a capped bottom outlet.
- Remove the bottom cap of the column and collect the flow-through.
- Wash twice with 2.5 mL each of Wash Buffer.
- Optional: To remove contaminants such as chaperones, perform an additional wash step with ATP buffer.
- Elute the GST-tagged protein by adding 0.5 mL Elution Buffer.
- Repeat step 11 five times, for a total of six elutions. Collect each elution fraction separately. Optional: Incubate the resin for 15 min in Elution Buffer before collecting the eluate to increase protein yields.
- Determine the protein concentration of the elution fractions with Bradford assay, using BSA as protein standard.
- Analyze all fractions by SDS-PAGE. Note: Do not boil membrane proteins. Instead, incubate the sample at 46 °C for 30 min in preparation for SDS-PAGE analysis.
- Optional: Perform Western Blot experiment using GST Antibody.
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